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Past Cohorts
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Cohort 2018
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Semester 2
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Bioinformatics
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RNASeq Analysis
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QualityControl and PCA - Part1
QualityControl and PCA - Part1
Click
NGSQualityControlPart1.pdf
link to view the file.
◄ Hash table exercise
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Course Details
Course detailts (Beccuti)
Exam Example
Deep sequencing Introduction
Microarray
Papers
DNA instruments history
Library Preparation
Introduction to Sequence Alignment
Dynamic programming for Sequence Alignment
Global alignment vs Local alignment
Space efficient sequence alignment
Read mapping
Exercies on Sequence Alignment
Schema for alignment
Hash table exercise
Coverage and FastQ file format
Transcripts Identification
Normalization
Differential Expression Analysis
Paper
Interpretation
Projects
RNASeqApplications
Clustering - Kmeans algorithm
Hierarchical Clustering
R script for clustering
R - general information
R script for money change
R script for global alignment
Dataset PAHCompounds
Dataset SamplesFeatures
Rscript for data analysis
OPECompounds
R Code for OPEs analysis
Coverage and FastQ file format ►
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