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Cohort 2018
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Semester 2
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Bioinformatics
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Sequence Alignment
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Read mapping
Read mapping
Click
IntroReadMapping.pdf
link to view the file.
◄ Space efficient sequence alignment
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Course Details
Course detailts (Beccuti)
Exam Example
Deep sequencing Introduction
Microarray
Papers
DNA instruments history
Library Preparation
Introduction to Sequence Alignment
Dynamic programming for Sequence Alignment
Global alignment vs Local alignment
Space efficient sequence alignment
Exercies on Sequence Alignment
Schema for alignment
Hash table exercise
QualityControl and PCA - Part1
Coverage and FastQ file format
Transcripts Identification
Normalization
Differential Expression Analysis
Paper
Interpretation
Projects
RNASeqApplications
Clustering - Kmeans algorithm
Hierarchical Clustering
R script for clustering
R - general information
R script for money change
R script for global alignment
Dataset PAHCompounds
Dataset SamplesFeatures
Rscript for data analysis
OPECompounds
R Code for OPEs analysis
Exercies on Sequence Alignment ►
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