Student Wiki on methodology
This Wiki is intended to collectively make the point on methodologies employed in research papers we analyze during the course.
"Writers" are students who wish to contribute to a specific subject.
Before contributing, please add your name in the "Writers group choice".
When initiating a contribution, please indicate your name in brackets.
PLEASE: DO NOT change the INDEX page !!!
This page contains the links to the seven official subjects, which are the same in the Choice.
To contribute, go to the right page by clicking on the description here in the index, then click EDIT and contribute. At the end, please save.
Index
Chromatin: ChIP-Seq, DNase-Seq, FAIRE, ATAC-Seq, Nucleosome positioning
Transcriptome analysis: special techniques, RNA-seq, GRO-seq, CAGE, etc.
Long-range chromatin interactions: 3C and derivatives up to Hi-C
RNA binding protein mapping: RIP, CLIP, HITS-CLIP, PAR-CLIP
Knocking-down and Knocking-out genes